XML stylesheets

From BioWeka

Introduction

The XML-Stylesheets folder (/etc/stylesheets/) of BioWeka's distribution offers a collection of XSL stylesheets to convert XML files into the ARFF format.

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Overview

The collection contains the following stylesheets:

extract-internal-data-from-mage-ml.xsl: Extracts the internal microarray data from MAGE-ML files and stores the data items as separate (tab-delimited) files. Does not produce ARFF files and thus can not be used with the XslXmlLoader class. Use the CSVLoader class from BioWeka or the CSVLoader class from Weka (may not work with every tab-delimited file) instead to load the tab-delimited files.
iprscan.xsl: Converts the merge.xml file of InterProScan into the sparse ARFF format.
mage-ml.xsl: Converts internal as well as external microarray data from MAGE-ML files into the ARFF format.
proml.xsl: Converts ProML files into the ARFF format.