External links

From BioWeka

Contents 1 Books 2 Papers 3 Data sets 4 Weka-related sites 5 Data Mining sites 6 Bioinformatics-related sites 7 Online articles

Books

• Data Mining: Practical Machine Learning Tools and Techniques (Second Edition), Ian H. Witten, Eibe Frank, Morgan Kaufmann, June 2005, 525 pages, Paper, ISBN 0-12-088407-0

Papers

• Frank E, Hall M, Trigg L, Holmes G, Witten IH. Data mining in bioinformatics using Weka. Bioinformatics. 2004 Oct 12;20(15):2479-81. Epub 2004 Apr 8.

Other papers may be found by searching PubMed for Weka NOT Bird or using Google Scholar by searching for Weka Bioinformatics.

Data sets

• BioInformatics Group Seville: many biological data sets in ARFF format.
• Multi-Class Protein Fold Recognition Using Random Forests: different data sets related to protein folding

Weka-related sites

• Weka 3: Data Mining Software in Java
• Grid Weka: Grid computing with Weka
• Weka FAQ: Weka Frequently Asked Questions
• Weka-CG: Computational Genetics (CG) Tools for the Weka Software Package
• WekaDoc: Wiki-project for the documentation of Weka

Data Mining sites

• YALE: Yet Another Learning Environment (supports Weka classifier)

Bioinformatics-related sites

• BioJava: Java framework for processing biological data
• BioSchemas: Collaborative development of XML schemas for biological
• BioServices.net: Bioinformatics-related blog
• JAligner: Open source Java implementation of the Smith-Waterman algorithm
• ProML: Protein Markup Language

Online articles

• Maschinenlernen, Martin Szugat, Java Magazin, 3.2006: Technical article about how to use the Weka API within Java to build a simple text classification program (in German)
• Wikimanie, Martin Szugat, Entwickler 1.2006: Technical article about how to install, configure and use the MediaWiki software for the BioWeka website (in German).
• Im Datenrausch, Martin Szugat, Linux Enterprise 1.2005: Introduction into Weka for data mining (in German)